miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|73934016|gb|DT517326.1|DT517326 TTTTTTTTTTTTTTTTTTAGACCCATTTAGATATCCTATAATTTTTCCACTCATAATCCTTAAAATTTTTATAATAATCT
ATATATATATATATTTATAGCTTGTAACAGCTAATCTTCATCTTCACTACGACTAGTGTTTTTCAATTTCTAACCCATTT
ATTTTATGTACATAAAAAAGAAAATGAACTGTGCTAAATCTTTCACGTGCCACCTGCCACACGTGTGGGTCAGAATTCTG
ACAATTTCATGTAATAATCCGAAGACGGTGACGGAGGCATTGACGGAGGTGGCGCCCTTAAATCTTTAAAATACTCCCTT
ATATCCACCCCAGCTGCCGTTGCCCTCTCCGTTAACTCCCCGTCGTCTCTCGACGGAATAAACGGCGGTCTTAGGACTTC
CGTTAATAGGTCCCACCTTACACCCTTAAAAAACACATGCTCCTTAATCTCACAAGCTCCACGTTGATACCCCAACCTTT
GTGTGGGGTCCTTCTCTAACAGCCGTTCAATCAAGTCTGTTAACTCGTTTCGTTTCCCGATAAACTCCGGCTTCTTGGCC
AATACGTTTCGAAACGTTTCCTTCCGGTTCTTCCCTACAAAAGGCGTCGTCCCGTATAACATCTCGAAGCTCAAAATTCC
AAGAGCCCACCAATCAACAGCGAACTCGTGCCCATCTCCTCTTACAACCTCCGGCGAGACATATTCCTCTGTGCCCACGA
ACGAGTTGGACCGTTCTCCATTGTTGAAGCTTAGTTTTCT




Most similar to sp|Q9LSF1|OXI1_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9LSF1|OXI1_ARATH Serine/threonine-protein kinase OXI1
           OS=Arabidopsis thaliana GN=OXI1 PE=1 SV=1
          Length = 421

 Score =  169 bits (427), Expect = 2e-41
 Identities = 78/132 (59%), Positives = 101/132 (76%)
 Frame = -1

Query: 754 LSFNNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILSFEMLYGTTPFVGKNRKET 575
           +S ++GE+SNSFVGTEEYV+PEV+ GDGH+FAVDWW+LG++ +EMLYG TPF G NRKET
Sbjct: 225 VSDSSGEKSNSFVGTEEYVAPEVISGDGHDFAVDWWSLGVVLYEMLYGATPFRGSNRKET 284

Query: 574 FRNVLAKKPEFIGKRNELTDLIERLLEKDPTQRLGYQRGACEIKEHVFFKGVRWDLLTEV 395
           F  +L+K P   G+   L DLI RLLEKDP++R+  +    EIK H FF+GV W+ +  V
Sbjct: 285 FYRILSKPPNLTGETTSLRDLIRRLLEKDPSRRINVE----EIKGHDFFRGVDWEKVILV 340

Query: 394 LRPPFIPSRDDG 359
            RPP+IP+ DDG
Sbjct: 341 SRPPYIPAPDDG 352